High-Throughput Interaction Data Matrix Analysis
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Protein-protein interaction/file analysis resources on the web

 Molecular Interactions Databases

  • Mint
  • IntAct
  • Bind
  • Dip
  • Drosophila Protein Interaction Map (PIM) Database
  • The Grid General repository for interaction datasets

     Software for Interaction Networks Analysis

  • Cytoscape
  • Visant
  • OsPrey

     Matrix Data Analysis/Visualization/Clustering

  • EPCLUST Data clustering, visualization and analysis
    • A web application written in Python by Andrea Cabibbo